- Class: 3
- Architecture: 3.40:3-Layer(aba) Sandwich
- Topology: 3.40.50:Rossmann fold
- Homology: 3.40.50.1380:Methylglyoxal synthase-like domain
PDB Entries
PDB ID | OPM | Mutant | Chain Formula | Resolution | HETNAM | |||
---|---|---|---|---|---|---|---|---|
Amino Acid sequence | SCOPe Family Level | CATH Homology Level | ||||||
1a9x | [A4B4] | [A4B4] | [A4B4] | 1.8 | ADP:ADENOSINE-5___sq___-DIPHOSPHATE CL:CHLORIDE ION CYG:2-AMINO-4-(AMINO-3-OXO-PROPYLSULFANYLCARBONYL)-BUTYRICACID K:POTASSIUM ION MN:MANGANESE (II) ION NET:TETRAETHYLAMMONIUM ION ORN:L-ORNITHINE PO4:PHOSPHATE ION | |||
1b93 | [A6] | [A6] | [A6] | 1.9 | FMT:FORMIC ACID PO4:PHOSPHATE ION | |||
1bxr | [A4B4] | [A4B4] | [A4B4] | 2.1 | ANP:PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER CL:CHLORIDE ION K:POTASSIUM ION MN:MANGANESE (II) ION NET:TETRAETHYLAMMONIUM ION ORN:L-ORNITHINE | |||
1c30 | [A4B4] | [A4B4] | [A4B4] | 2 | ADP:ADENOSINE-5___sq___-DIPHOSPHATE CL:CHLORIDE ION K:POTASSIUM ION MN:MANGANESE (II) ION NET:TETRAETHYLAMMONIUM ION ORN:L-ORNITHINE PO4:PHOSPHATE ION | |||
1c3o | [A4B4] | [A4B4] | [A4B4] | 2.1 | ADP:ADENOSINE-5___sq___-DIPHOSPHATE CL:CHLORIDE ION GLN:GLUTAMINE K:POTASSIUM ION MN:MANGANESE (II) ION NET:TETRAETHYLAMMONIUM ION ORN:L-ORNITHINE PO4:PHOSPHATE ION | |||
1ce8 | [A4B4] | [A4B4] | [A4B4] | 2.1 | ADP:ADENOSINE-5___sq___-DIPHOSPHATE CL:CHLORIDE ION IMP:INOSINIC ACID K:POTASSIUM ION MN:MANGANESE (II) ION NET:TETRAETHYLAMMONIUM ION ORN:L-ORNITHINE PO4:PHOSPHATE ION | |||
1cs0 | [A4B4] | [A4B4] | [A4B4] | 2 | ADP:ADENOSINE-5___sq___-DIPHOSPHATE CL:CHLORIDE ION CYG:2-AMINO-4-(AMINO-3-OXO-PROPYLSULFANYLCARBONYL)-BUTYRICACID K:POTASSIUM ION MN:MANGANESE (II) ION NET:TETRAETHYLAMMONIUM ION ORN:L-ORNITHINE PO4:PHOSPHATE ION | |||
1egh | [A6] | [A6] | [A6] | 2 | PGA:2-PHOSPHOGLYCOLIC ACID | |||
1g8m | [A2] | [A2] | [A2] | 1.75 | G:GUANOSINE-5___sq___-MONOPHOSPHATE K:POTASSIUM ION MSE:SELENOMETHIONINE | |||
1ik4 | [A6] | [A6] | [A6] | 2 | PGH:PHOSPHOGLYCOLOHYDROXAMIC ACID | |||
1jdb | [A4B4] | [A4B4] | [A4B4] | 2.1 | ADP:ADENOSINE-5___sq___-DIPHOSPHATE CL:CHLORIDE ION GLN:GLUTAMINE K:POTASSIUM ION MN:MANGANESE (II) ION NET:TETRAETHYLAMMONIUM ION ORN:L-ORNITHINE PO4:PHOSPHATE ION | |||
1kee | [A4B4] | [A4B4] | [A4B4] | 2.1 | 143:S-2,3-DIHYDRO-5-GLYCIN-2-YL-ISOXAZOL-3-YL-CYSTEINE ADP:ADENOSINE-5___sq___-DIPHOSPHATE CL:CHLORIDE ION K:POTASSIUM ION MN:MANGANESE (II) ION NET:TETRAETHYLAMMONIUM ION ORN:L-ORNITHINE PO4:PHOSPHATE ION | |||
1m6v | [A4B4] | [A4B4] | [A4B4] | 2.1 | ADP:ADENOSINE-5___sq___-DIPHOSPHATE CL:CHLORIDE ION K:POTASSIUM ION MN:MANGANESE (II) ION NET:TETRAETHYLAMMONIUM ION ORN:L-ORNITHINE PO4:PHOSPHATE ION | |||
1m9n | [A2] | [A2] | [A2] | 1.93 | AMZ:AMINOIMIDAZOLE 4-CARBOXAMIDE RIBONUCLEOTIDE K:POTASSIUM ION XMP:XANTHOSINE-5___sq___-MONOPHOSPHATE | |||
1oz0 | [A2] | [A2] | [A2] | 2.5 | K:POTASSIUM ION MS1:2-[4-((2-AMINO-4-OXO-3,4-DIHYDRO-PYRIDO[3,2-D]PYRIMIDIN-6-YLMETHYL)-{3-[5-CARBAMOYL-3-(3,4-DIHYDROXY-5-PHOSPHONOOXYMETHYL-TETRAHYDRO-FURAN-2-YL)-3H-IMIDAZOL-4-YL]-ACRYLOYL}-AMINO)-BENZOYLAMINO]-PENTANEDIOIC ACID PO4:PHOSPHATE ION | |||
1p4r | [A2] | [A2] | [A2] | 2.55 | 354:N-[(S)-(4-{[(2-AMINO-4-HYDROXYQUINAZOLIN-6-YL)(DIHYDROXY)-LAMBDA~4~-SULFANYL]AMINO}PHENYL)(HYDROXY)METHYL]-L-GLUTAMIC ACID AMZ:AMINOIMIDAZOLE 4-CARBOXAMIDE RIBONUCLEOTIDE K:POTASSIUM ION XMP:XANTHOSINE-5___sq___-MONOPHOSPHATE | |||
1pkx | [A2] | [A2] | [A2] | 1.9 | K:POTASSIUM ION XMP:XANTHOSINE-5___sq___-MONOPHOSPHATE | |||
1pl0 | [A2] | [A2] | [A2] | 2.6 | AMZ:AMINOIMIDAZOLE 4-CARBOXAMIDE RIBONUCLEOTIDE BW2:N-(4-{[(2-AMINO-4-OXO-3,4-DIHYDROQUINAZOLIN-6-YL)AMINO]SULFONYL}BENZOYL)GLUTAMIC ACID K:POTASSIUM ION XMP:XANTHOSINE-5___sq___-MONOPHOSPHATE | |||
1s89 | [A6] | [A6] | [A6] | 2.22 | PGA:2-PHOSPHOGLYCOLIC ACID | |||
1s8a | [A6] | [A6] | [A6] | 2.2 | PGA:2-PHOSPHOGLYCOLIC ACID | |||
1t36 | [A4B4] | [A4B4] | [A4B4] | 2.1 | ADP:ADENOSINE-5___sq___-DIPHOSPHATE CL:CHLORIDE ION K:POTASSIUM ION MN:MANGANESE (II) ION NET:TETRAETHYLAMMONIUM ION ORN:L-ORNITHINE PO4:PHOSPHATE ION U:URIDINE-5___sq___-MONOPHOSPHATE | |||
1thz | [A2] | [A2] | [A2] | 1.8 | 326:2-{(E)-[5-HYDROXY-3-METHYL-1-(2-METHYL-4-SULFOPHENYL)-1H-PYRAZOL-4-YL]DIAZENYL}-4-SULFOBENZOIC ACID K:POTASSIUM ION | |||
1vmd | [A6] | [A6] | [A6] | 2.06 | CL:CHLORIDE ION SO4:SULFATE ION | |||
1wo8 | [A6] | [A6] | [A6] | 1.7 | SO4:SULFATE ION | |||
1zcz | [A2] | [A2] | [A2] | 1.88 | K:POTASSIUM ION PG4:TETRAETHYLENE GLYCOL | |||
2b1g | [A2] | [A2] | [A2] | 2.1 | 13A:7-(3,4-DIHYDROXY-5R-HYDROXYMETHYLTETRAHYDROFURAN-2-YL)-2,2-DIOXO-1,2R,3R,7-TETRAHYDRO-2L6-IMIDAZO[4,5-C][1,2,6]THIADIAZIN-4S-ONE K:POTASSIUM ION PO4:PHOSPHATE ION | |||
2b1i | [A2] | [A2] | [A2] | 2.02 | 93A:[3,4-DIHYDROXY-5R-(2,2,4-TRIOXO-1,2R,3S,4R-TETRAHYDRO-2L6-IMIDAZO[4,5-C][1,2,6]THIADIAZIN-7-YL)TETRAHYDROFURAN-2-YL]METHYL DIHYDROGEN PHOSPHATE K:POTASSIUM ION | |||
2iu0 | [A2] | [A2] | [A2] | 2.53 | 203:1,5-DIHYDROIMIDAZO[4,5-C][1,2,6]THIADIAZIN-4(3H)-ONE 2,2-DIOXIDE K:POTASSIUM ION | |||
2iu3 | [A2] | [A2] | [A2] | 2.9 | 203:1,5-DIHYDROIMIDAZO[4,5-C][1,2,6]THIADIAZIN-4(3H)-ONE 2,2-DIOXIDE K:POTASSIUM ION | |||
2x8w | [A6] | [A6] | [A6] | 1.95 | MLI:MALONATE ION | |||
2xw6 | [A6] | [A6] | [A6] | 1.08 | PO4:PHOSPHATE ION | |||
2yvq | [A] | [A] | [A] | 1.98 | ||||
3zzm | [A2] | [A2] | [A2] | 2.2 | GOL:GLYCEROL JLN:5-(FORMYLAMINO)-1-(5-O-PHOSPHONO-BETA-D-RIBOFURANOSYL)-1H-IMIDAZOLE-4-CARBOXYLICACID K:POTASSIUM ION PO4:PHOSPHATE ION | |||
4a1o | [A2] | [A2] | [A2] | 2.48 | AMZ:AMINOIMIDAZOLE 4-CARBOXAMIDE RIBONUCLEOTIDE JLN:5-(FORMYLAMINO)-1-(5-O-PHOSPHONO-BETA-D-RIBOFURANOSYL)-1H-IMIDAZOLE-4-CARBOXYLICACID K:POTASSIUM ION PO4:PHOSPHATE ION | |||
4ehi | [A2] | [A2] | [A2] | 2.28 | BTB:2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL MSE:SELENOMETHIONINE SO4:SULFATE ION | |||
5h3l | [A3] | [A3] | [A3] | 2.1 | CME:S,S-(2-HYDROXYETHYL)THIOCYSTEINE FMT:FORMIC ACID | |||
5uy8 | [A2] | [A2] | [A2] | 2.39 | 8UM:5-[(5S)-5-ETHYL-5-METHYL-6-OXO-1,4,5,6-TETRAHYDROPYRIDIN-3-YL]-N-(6-FLUORO-1-OXO-1,2-DIHYDROISOQUINOLIN-7-YL)THIOPHENE-2-SULFONAMIDE AMZ:AMINOIMIDAZOLE 4-CARBOXAMIDE RIBONUCLEOTIDE MG:MAGNESIUM ION | |||
5uz0 | [A2] | [A2] | [A2] | 1.79 | 8US:N-(6-FLUORO-1-OXO-1,2-DIHYDROISOQUINOLIN-7-YL)-5-[(3R)-3-HYDROXYPYRROLIDIN-1-YL]THIOPHENE-2-SULFONAMIDE AMZ:AMINOIMIDAZOLE 4-CARBOXAMIDE RIBONUCLEOTIDE MG:MAGNESIUM ION | |||
6f2c | [A6] | [A6] | [A6] | 2.34 | CL:CHLORIDE ION GOL:GLYCEROL |
*Chain Formula of OLIGAMI.
[ ] : Polypeptide - [AB] : Protein, [ab] : Small peptide
( ) : Nucleic acid - (AB) : DNA, (ab) : RNA
[ ] : Polypeptide - [AB] : Protein, [ab] : Small peptide
( ) : Nucleic acid - (AB) : DNA, (ab) : RNA